冷鲜猪肉供应链主要环节中微生物多样性宏基因组分析
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作者单位:

1.南京农业大学食品科技学院,南京 210095;2.中国检验检疫科学研究院,北京 100176

作者简介:

王宇 男 硕士研究生 研究方向为食品微生物 E-mail: 371949860@qq.com

通讯作者:

张万刚 教授 研究方向为肉品加工与质量安全控制 E-mail: wangang.zhang@njau.edu.cn
陈颖 研究员 研究方向为食品微生物分子检测与生物特征识别研究 E-mail: chenyingcaiq@163.com

中图分类号:

R155

基金项目:

国家重点研发计划(2022YFF1100704);市场总局科技计划项目(2022MK196)


Macrogenomic analysis of microbial diversity in the main links of the chilled pork supply chain
Author:
Affiliation:

1.College of Food Science and Technology, Nanjing Agricultural University, Nanjing210095, China;2.China Academy of Inspection and Quarantine Science, Beijing100176, China

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    摘要:

    目的 利用宏基因组学技术探究不同阶段冷鲜猪肉表面微生物群落结构及多样性变化,分析风险菌的组成及变化,为冷鲜肉中风险细菌的控制提供参考。方法 采用宏基因组学技术,对预冷后、排酸后及市售3个阶段的30份冷鲜猪肉样本进行测序,并进行微生物多样性变化和菌群代谢通路的分析。结果 不同阶段冷鲜猪肉菌群结构差异有显著性。从预冷到排酸再到市售,根瘤菌丰度变化导致了变形菌门相对丰度呈现先增后减趋势;索丝菌属丰度提升造成了厚壁菌门丰度占比的逐步提高。PCoA分析发现排酸肉与市售肉部分重叠,说明排酸肉细菌与市售肉中菌群相似。排酸后到市售肉样中,优势致腐菌热杀索丝菌(0.3%~14.5%)、莓实假单胞菌(0.02%~3.6%)和鲍曼不动杆菌(0.5%~3.3%)的相对丰度显著提升。代谢通路分析表明排酸肉样本中注释到的细菌有关代谢的编码基因丰度在3个阶段样本中最高,3组样本中部分协调糖代谢和氨基酸代谢的蛋白质和酶丰度呈上升的趋势,并且与索丝菌和假单胞菌变化趋势存在一致性。结论 排酸肉样本中的细菌种群与市售肉样本中相似,生产中应加强排酸过程中菌群的控制,同时采取适当措施控制嗜冷菌的繁殖,保障供应链中肉品质量安全。

    Abstract:

    Objective Macro-genomics technology was applied to explore the changes in microbial community structure and diversity on the surface of chilled pork at different stages and to analyze the composition and changes of risky bacteria, to provide a reference for the control of risky bacteria in chilled meat.Methods Macro-genomics technology was used to perform sequencing on 30 chilled pork samples at three stages: pre-cooling, post-mortem ageing, and marketing, and to analyze changes in microbial diversity and metabolic pathways of the flora.Results There were significant differences in the flora structure of chilled pork at different stages. From pre-cooling to acid excretion to marketing, the relative abundance of Rhizobium caused an increase and then a decrease in the relative abundance of Proteobacteria. The increase in the abundance of Brochothrix caused a gradual increase in the abundance of Firmicutes. The PCoA analysis showed that the acid-drainage pork partially overlapped with the commercially available pork, suggesting that the bacteria were similar. The relative abundance of the dominant spoilage bacteria, Brochothrix thermosphactaPseudomonas fragi, and Acinetobacter baumannii, was significantly increased in the samples from acid-expelled to commercially available meat. Metabolic pathway analyses indicated that the abundance of genes encoding bacteria related to metabolism annotated in the acid-expelled meat samples was the highest among the three stages of samples, the abundance of some of the proteins and enzymes that coordinate sugar metabolism and amino acid metabolism showed an increasing trend in the three groups of samples, and there was consistency with the trend of changes in Brochothrix and Pseudomonas.Conclusion The bacterial populations in the samples of aged meat were similar to those in the samples of saled meat, and the control of bacterial populations during post-mortem ageing should be strengthened during production, while appropriate measures should be taken to control the propagation of spoilage bacteria, to guarantee the quality and safety of meat in the process of supply chain.

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王宇,王娉,曲天铭,梁丽姣,赵晓美,陈颖,张万刚.冷鲜猪肉供应链主要环节中微生物多样性宏基因组分析[J].中国食品卫生杂志,2024,36(9):1000-1009.

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  • 收稿日期:2024-03-28
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  • 在线发布日期: 2025-01-01
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