饮用水中大肠埃希菌富集和DNA提取方法优化
DOI:
作者:
作者单位:

作者简介:

胡朝友 男 中级检验师 主要研究方向为微生物检验E-mail:hu_chaoyou@163.com

通讯作者:

中图分类号:

基金项目:

江苏省卫生厅预防医学2012年科研课题资助项目(Y2012049);苏州市饮用水安全与水性疾病监测公共服务平台开放实验室开放课题资助项目(SZPT2012001)


Optimized methods for Escherichia coli concentration and DNA extraction in drinking water
Author:
Affiliation:

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    建立一种灵敏、可靠、快速对水中大肠埃希菌富集和DNA提取的最佳方法组合,以便应用TaqMan探针实时荧光PCR技术进行定量检测。方法 膜过滤洗脱环节,采用3种不同的方法进行富集洗脱,通过平板计数法比较各方法富集洗脱效果;DNA提取环节,采用4种方法进行DNA提取。所得DNA进行实时荧光PCR扩增,定量检测DNA拷贝数,比较各方法的DNA提取效率;并采用最优的方法组合,对模拟水样进行膜过滤和DNA提取,考察全过程的回收率和灵敏度。结果 采用加表皮葡萄球菌过滤+漩涡混合器+玻璃棒刮擦洗脱方法(C法),洗脱效率能达到75%~93%;TritonX-100法和磁珠法的线性范围达到6个数量级稀释度(100~10-5),r2分别为0.998和0.999,然而,TritonX-100法更省时,更简便,经济性更好。采用该最优的方法组合,其全过程的回收率为79.7%~104.0%且灵敏度达到1cfu/ml。结论 C法+Triton-100法组合可以快速、准确、经济地对饮用水中大肠埃希菌进行富集和DNA提取。

    Abstract:

    To establish anoptimizedmethodcombination, which was sensitive, accurate and rapid for Escherichia coli enrichment and DNA extraction, so that we can use a real-time qPCR method (TaqMan probe) for detection and enumeration of Escherichia coli in drinking water.MethodsIn membrane filtration-elution step, the bacteria particles were concentrated by three different methods, and the recovery of E.coli was estimated quantitatively by Enumerating CFU on plate agar.In DNA extraction step, the genomic DNA were extracted with four different methods, and the TaqMan PCR assay was used to amplify and measure the recovery of the extracted DNA. ResultsThe recovery of E.coli eluted from the membrane was 76%-93% by using C-method (filtrating with Staph.epidermidis+vortex washing+glass rodscraping). Of the four extraction protocols, Triton-100and beads extraction method had the same linear range (100-10-5), r2:0.998and 0.999respectively. However, the first method had significantly lower cost and time consuming. The recovery of E.coli from water was 79.7%-104.0%, and the sensitivity of qPCR was 1cfu/ml for the whole processing using the optimal methods for DNA extraction.ConclusionThe optimal methodcombination (C method+TritonX-100method) was rapid, accurate and economic for E. colienrichment from water and DNA extraction.

    参考文献
    相似文献
    引证文献
引用本文

胡朝友,傅春玲,张宏斌.饮用水中大肠埃希菌富集和DNA提取方法优化[J].中国食品卫生杂志,2014,26(1):36-39.

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:2013-09-09
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2014-03-04
  • 出版日期:
文章二维码
《中国食品卫生杂志》邮寄地址与联系方式变更通知
关闭